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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7784408_7786618_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7784408 - 7786618

Intron Length:

2211

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGAGTG

5'SS Class:

strong_major

3'SS Sequence:

CCTTTTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTGAC

U12 Branch Point Sequence:

CTTCCTTTGACT

Flanking Amino Acid:

EPEETLSSRRRELIMKLKSH

Intron Amino Acid Position:

350

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.7

0.87

0.8

35.2

Major BPS

74.1

0.6

66.7

39.9

Major PPT

0.85

0.7

80.3

31.8

Minor 5ss

28.6

-2.5

3.4

37.5

47.2

Minor BPS

73.9

0.83

1.2

84.49

36.3

Associated Gene:

Gene:

GPC3

Ensembl Gene ID:

ENSAPLG00000014901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036183

7705949 - 7909190

203242

ENSAPLT00000015537

7705949 - 7845477

139529