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Intron Name: Anas_platyrhynchos_platyrhynchos_10_7817390_7845304_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

7817390 - 7845304

Intron Length:

27915

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGATGGGG

5'SS Class:

major

3'SS Sequence:

CTTCTGCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAACCAT

U12 Branch Point Sequence:

TAACCATTACTC

Flanking Amino Acid:

RVRNQLRFLAELAYDLDIDD

Intron Amino Acid Position:

484

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

56.7

42.4

Major BPS

57.8

0.19

1.3

67.1

39.2

Major PPT

83.7

0.76

0.8

80.6

31.5

Minor 5ss

23.2

-3.1

3.2

29.2

43.4

Minor BPS

48.4

-0.1

1.8

59.47

39.1

Associated Gene:

Gene:

GPC3

Ensembl Gene ID:

ENSAPLG00000014901

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015537

7705949 - 7845477

139529