Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_7979474_7986587_R

Intron Information:

Intron Rank:

129472

Intron Class:

major

Intron Phase:

Intron Coordinates:

7979474 - 7986587

Intron Length:

7114

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTTTGTTTTTAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTGTTTTTAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.3

0.74

76.8

33.4

Major BPS

71.2

0.53

70.3

31.9

Major PPT

75.6

0.58

1.1

79.2

38.4

Minor 5ss

31.6

-2.1

3.1

39.6

45.9

Minor BPS

48.1

-0.2

1.9

59.36

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016855

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045411

7977884 - 7986948

9065