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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8030686_8157622_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8030686 - 8157622

Intron Length:

126937

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCCGA

5'SS Class:

strong_major

3'SS Sequence:

CTCCCCTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTAAAT

U12 Branch Point Sequence:

GGAGACTAAATG

Flanking Amino Acid:

SKKEVRLRPSRNFYYITILR

Intron Amino Acid Position:

171

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

0.9

42.7

Major BPS

0.27

1.1

67.3

35.2

Major PPT

81.7

0.71

0.7

75.9

26.1

Minor 5ss

31.8

-2.1

38.9

46.2

Minor BPS

43.2

-0.6

1.9

42.66

42.3

Associated Gene:

Gene:

HS6ST2

Ensembl Gene ID:

ENSAPLG00000023782

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026610

8030111 - 8159747

129637