Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8331869_8331956_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8331869 - 8331956

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCATTTA

5'SS Class:

major

3'SS Sequence:

TTCCATTTGGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

GTGTTCTAAATT

Flanking Amino Acid:

SEKKIHRDIKAANVLLSEQG

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

73.7

33.1

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

75.4

0.57

72.4

37.4

Minor 5ss

36.6

-1.5

3.2

49.1

47.1

Minor BPS

62.2

0.46

1.7

75.75

41.6

Associated Gene:

Gene:

STK26

Ensembl Gene ID:

ENSAPLG00000004174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004308

8326703 - 8339049

12347

ENSAPLT00000020324

8326278 - 8360899

34622