Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8382639_8384890_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8382639 - 8384890

Intron Length:

2252

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTCGTATT

5'SS Class:

major

3'SS Sequence:

TTTATTCCTATAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

AATTTCTTAAAA

Flanking Amino Acid:

SSDTNYTLFYWFDGLKNPKK

Intron Amino Acid Position:

168

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.1

0.47

1.2

75.8

39.5

Major BPS

96.5

1.15

0.6

34.2

Major PPT

82.6

0.73

0.7

77.7

31.2

Minor 5ss

37.1

-1.5

49.5

40.8

Minor BPS

72.7

0.71

1.3

76.28

33.8

Associated Gene:

Gene:

IL13RA1

Ensembl Gene ID:

ENSAPLG00000004476

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004594

8378565 - 8391902

13338