Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8424315_8424471_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8424315 - 8424471

Intron Length:

157

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTGGTGAC

5'SS Class:

major

3'SS Sequence:

TTCCCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

CAAAATGTAATT

Flanking Amino Acid:

YLYIVKMISEDTLLAYWNKF

Intron Amino Acid Position:

1292

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.6

0.56

1.2

67.9

37.7

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

86.5

0.82

0.7

84.3

23.5

Minor 5ss

27.9

-2.5

3.2

34.6

41.8

Minor BPS

42.7

-0.4

2.1

55.34

40.9

Associated Gene:

Gene:

DOCK11

Ensembl Gene ID:

ENSAPLG00000004495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038581

8399313 - 8477766

78454

ENSAPLT00000004898

8399530 - 8477431

77902