Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8427910_8429901_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8427910 - 8429901

Intron Length:

1992

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CCCTTTTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

GGACTCTTACCT

Flanking Amino Acid:

HAFDNRYQHKNQQAKIAQLY

Intron Amino Acid Position:

1157

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

1.2

77.9

38.6

Major BPS

69.2

0.48

37.1

Major PPT

88.4

0.86

0.6

86.9

23.7

Minor 5ss

31.3

-2.1

2.9

41.4

Minor BPS

54.3

0.21

1.6

67.8

42.4

Associated Gene:

Gene:

DOCK11

Ensembl Gene ID:

ENSAPLG00000004495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038581

8399313 - 8477766

78454

ENSAPLT00000004898

8399530 - 8477431

77902