Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8435292_8435869_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8435292 - 8435869

Intron Length:

578

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAAGTGC

5'SS Class:

major

3'SS Sequence:

TTGTTTGTTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

AAAAAAATAATA

Flanking Amino Acid:

DFLAINKLLKYSWFFFEALA

Intron Amino Acid Position:

959

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.59

63.3

37.9

Major BPS

71.2

0.53

70.3

31.9

Major PPT

80.2

0.68

0.9

73.5

41.9

Minor 5ss

-2.2

3.3

41.1

45.6

Minor BPS

41.4

-0.6

1.8

48.73

34.1

Associated Gene:

Gene:

DOCK11

Ensembl Gene ID:

ENSAPLG00000004495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038581

8399313 - 8477766

78454

ENSAPLT00000004898

8399530 - 8477431

77902