Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8441712_8442146_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8441712 - 8442146

Intron Length:

435

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAGGGCGG

5'SS Class:

major

3'SS Sequence:

TGTCTGTTCACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTCAAT

U12 Branch Point Sequence:

AGTGCTTCAATG

Flanking Amino Acid:

LGLGDTESRRQSSVDAKWVD

Intron Amino Acid Position:

795

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

66.2

0.38

1.2

46.1

49.1

Major BPS

64.5

0.36

1.3

74.4

37.1

Major PPT

77.9

0.63

0.9

71.7

38.2

Minor 5ss

28.3

-2.5

3.4

29.2

43.4

Minor BPS

49.7

-0.1

1.7

54.47

41.2

Associated Gene:

Gene:

DOCK11

Ensembl Gene ID:

ENSAPLG00000004495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038581

8399313 - 8477766

78454

ENSAPLT00000004898

8399530 - 8477431

77902