Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8444122_8445233_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8444122 - 8445233

Intron Length:

1112

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGGATC

5'SS Class:

strong_major

3'SS Sequence:

TCTTCTCTTCTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

GTGTGCTCATCC

Flanking Amino Acid:

VIKDIPLDFTNCVTASYIPI

Intron Amino Acid Position:

598

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.75

0.9

79.7

33.7

Major BPS

79.7

0.74

79.6

35.6

Major PPT

84.4

0.77

0.7

77.4

31.4

Minor 5ss

38.5

-1.3

3.3

52.3

38.8

Minor BPS

46.1

-0.3

2.2

59.28

45.5

Associated Gene:

Gene:

DOCK11

Ensembl Gene ID:

ENSAPLG00000004495

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004898

8399530 - 8477431

77902

ENSAPLT00000038581

8399313 - 8477766

78454