Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_8493819_8494120_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8493819 - 8494120

Intron Length:

302

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAC|GTAAGATGT

5'SS Class:

major

3'SS Sequence:

CTTGCTTTTTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATTAT

U12 Branch Point Sequence:

ATGTGTTGAAAA

Flanking Amino Acid:

DTDGGRLKQKTTQLKKFLGK

Intron Amino Acid Position:

481

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.8

0.58

1.3

72.5

39.9

Major BPS

0.42

1.3

60.1

46.3

Major PPT

0.56

78.8

33.5

Minor 5ss

-1

3.1

55.7

42.1

Minor BPS

47.4

-0.2

1.9

59.7

40.1

Associated Gene:

Gene:

WDR44

Ensembl Gene ID:

ENSAPLG00000010695

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011206

8483429 - 8508300

24872

ENSAPLT00000039642

8484235 - 8501537

17303

ENSAPLT00000024464

8484235 - 8500707

16473