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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8495261_8496158_R


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8495261 - 8496158

Intron Length:
898

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGTAATG

5'SS Class:
major

3'SS Sequence:
ATTTTTTCCGTAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TAATCAA

U12 Branch Point Sequence:
CTCATCTTGACT

Flanking Amino Acid:
SNSGRELTDEEILASVMIKN

Intron Amino Acid Position:
408

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.4
0.53
1.1
68.3
42.6

Major BPS
71.2
0.53
1
72.3
32.8

Major PPT
81.4
0.71
0.7
78
30

Minor 5ss
35.8
-1.6
3.3
48.6
47.2

Minor BPS
65.1
0.56
1.4
75.08
42.1

Associated Gene:

Gene:
WDR44

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8484235 - 8500707
16473

8483429 - 8508300
24872

8484235 - 8501537
17303