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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8787092_8788749_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8787092 - 8788749

Intron Length:

1658

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATTTAG

5'SS Class:

strong_major

3'SS Sequence:

CTTCTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CGCTAAT

U12 Branch Point Sequence:

TCACCGCTAATG

Flanking Amino Acid:

LFKGIKSSGKVVYFTALFPY

Intron Amino Acid Position:

262

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

76.8

34.6

Major BPS

0.42

1.2

67.3

37.8

Major PPT

84.6

0.78

0.6

80.9

24.3

Minor 5ss

39.6

-1.2

2.8

49.3

46.9

Minor BPS

43.6

-0.6

2.3

50.27

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010273

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038800

8781934 - 8809609

27676

ENSAPLT00000010761

8781934 - 8795502

13569