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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8877751_8878351_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8877751 - 8878351

Intron Length:

601

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTAA

5'SS Class:

strong_major

3'SS Sequence:

CCATGGCAAATAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TACCTTTTAATA

Flanking Amino Acid:

LSEDDKQNNAKYAVSMARRI

Intron Amino Acid Position:

594

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

23.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

49.8

-0

43.6

36.5

Minor 5ss

41.2

-1

2.8

49.4

41.3

Minor BPS

62.8

0.4

1.2

65.03

35.7

Associated Gene:

Gene:

PLS3

Ensembl Gene ID:

ENSAPLG00000011074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026782

8876966 - 8920248

43283

ENSAPLT00000011603

8876966 - 8920248

43283