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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8880405_8881038_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8880405 - 8881038

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTCCGTTTTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATCAA

U12 Branch Point Sequence:

TCAGGCTTGATC

Flanking Amino Acid:

GVNPHVNHLYGDLQDALVIL

Intron Amino Acid Position:

428

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

81.8

38.5

Major BPS

63.9

0.34

1.2

40.9

Major PPT

0.74

0.8

81.5

30.4

Minor 5ss

44.9

-0.5

2.9

58.5

45.8

Minor BPS

48.7

-0.1

1.9

57.52

42.2

Associated Gene:

Gene:

PLS3

Ensembl Gene ID:

ENSAPLG00000011074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026782

8876966 - 8920248

43283

ENSAPLT00000011603

8876966 - 8920248

43283