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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8882508_8883538_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
8882508 - 8883538

Intron Length:
1031

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTATTGAGA

5'SS Class:
major

3'SS Sequence:
TCATCCATTTCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAT

U12 Branch Point Sequence:
TATTTCTCATCC

Flanking Amino Acid:
KINNFSSDIKDSRAYFHLLN

Intron Amino Acid Position:
296

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
64.2
41.4

Major BPS
94.9
1.12
0.6
93.9
14.7

Major PPT
77.6
0.62
0.9
74.3
34.9

Minor 5ss
37.8
-1.4
3.1
49.1
46.7

Minor BPS
58.2
0.24
1.8
71.62
39.4

Associated Gene:

Gene:
PLS3

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

8876966 - 8920248
43283