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Intron Name: Anas_platyrhynchos_platyrhynchos_10_8897095_8920101_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

8897095 - 8920101

Intron Length:

23007

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCTTT

5'SS Class:

strong_major

3'SS Sequence:

TTTCTCTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TTTCACATAGCG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

81.6

33.2

Major BPS

77.7

0.69

83.3

27.7

Major PPT

90.6

0.91

0.6

89.1

Minor 5ss

55.3

0.18

2.7

73.8

36.4

Minor BPS

47.9

-0.3

2.1

63.53

43.5

Associated Gene:

Gene:

PLS3

Ensembl Gene ID:

ENSAPLG00000011074

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026782

8876966 - 8920248

43283

ENSAPLT00000011603

8876966 - 8920248

43283