Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9056255_9056795_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9056255 - 9056795

Intron Length:

541

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTAGGAGC

5'SS Class:

major

3'SS Sequence:

TCTCATTTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TTTTGCTAAATG

Flanking Amino Acid:

IYATFQVPLQGKLESEVQNF

Intron Amino Acid Position:

130

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.2

0.64

1.2

41.8

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

75.5

0.57

71.7

37.9

Minor 5ss

-2.4

2.9

35.2

40.9

Minor BPS

57.9

0.11

2.1

70.75

43.1

Associated Gene:

Gene:

IL13RA2

Ensembl Gene ID:

ENSAPLG00000011907

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012398

9041125 - 9062757

21633