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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9117730_9288595_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

9117730 - 9288595

Intron Length:

170866

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAAGCTCT

5'SS Class:

major

3'SS Sequence:

CTTTCCTTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTCAG

U12 Branch Point Sequence:

ATTTCAGTGAAG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.5

1.1

66.4

40.1

Major BPS

67.2

0.43

1.5

77.4

37.3

Major PPT

90.3

0.91

0.6

88.3

21.3

Minor 5ss

48.7

-0.1

2.8

71.7

38.9

Minor BPS

45.1

-0.5

2.4

59.29

42.2

Associated Gene:

Gene:

HTR2C

Ensembl Gene ID:

ENSAPLG00000012164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037631

9076991 - 9288746

211756