Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9476667_9477477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9476667 - 9477477

Intron Length:

811

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCAC

5'SS Class:

major

3'SS Sequence:

ATTTGTGAATTAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

TTATTCTAAAAT

Flanking Amino Acid:

GRQQVTSSEQMEFLTQALQH

Intron Amino Acid Position:

376

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.4

0.67

1.1

63.9

42.4

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

61.3

0.25

1.1

60.5

44.5

Minor 5ss

29.7

-2.3

3.5

40.5

Minor BPS

63.7

0.51

1.8

81.73

39.5

Associated Gene:

Gene:

TEX11

Ensembl Gene ID:

ENSAPLG00000013369

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032157

9470686 - 9487757

17072

ENSAPLT00000013954

9470686 - 9488535

17850