Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9511768_9511997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9511768 - 9511997

Intron Length:

230

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCAGGCACAGCT

Flanking Amino Acid:

PQSNARLNFKVPLLPLLPLV

Intron Amino Acid Position:

557

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.1

0.73

0.9

73.9

29.7

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

83.4

0.75

0.8

77.6

31.1

Minor 5ss

29.2

-2.4

3.1

32.8

35.7

Minor BPS

37.3

-0.8

2.2

53.86

Associated Gene:

Gene:

SLC7A3

Ensembl Gene ID:

ENSAPLG00000014008

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038703

9510062 - 9516973

6912

ENSAPLT00000014629

9510062 - 9516973

6912