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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9512829_9513090_R


Intron Information:

Intron Rank:
8

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9512829 - 9513090

Intron Length:
262

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CCG|GTGGGTGCC

5'SS Class:
major

3'SS Sequence:
CCCGTCTGCACAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CACTGAG

U12 Branch Point Sequence:
TTGTGCAGCACT

Flanking Amino Acid:
SLVAVCVLILRYQSGQLNSP

Intron Amino Acid Position:
430

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
71.6
0.51
1.1
62.1
38.4

Major BPS
48.9
-0
1.5
46.7
38.9

Major PPT
65.3
0.35
0.9
59.3
35.7

Minor 5ss
27.6
-2.6
3.3
35.7
41.2

Minor BPS
43.2
-0.4
2.5
69.63
46.8

Associated Gene:

Gene:
SLC7A3

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9510062 - 9516973
6912

9510062 - 9516973
6912