Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9555584_9555669_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9555584 - 9555669

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTGAGCTCA

5'SS Class:

major

3'SS Sequence:

CCGGCTTTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGGCAC

U12 Branch Point Sequence:

GCTGGCACCACT

Flanking Amino Acid:

LRSKVGVPATDVIDVCDKLG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.61

37.4

Major BPS

45.1

-0.3

1.4

52.4

43.3

Major PPT

73.9

0.54

0.9

64.4

41.4

Minor 5ss

39.2

-1.2

2.9

48.7

Minor BPS

36.4

-0.9

2.4

53.42

47.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021497

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017815

9551508 - 9557025

5518