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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9565009_9565309_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9565009 - 9565309

Intron Length:

301

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGAC

5'SS Class:

strong_major

3'SS Sequence:

TATCTGTGTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

CTGCCTTTATCT

Flanking Amino Acid:

NEKLAMFMFQDGMLDRHEFL

Intron Amino Acid Position:

245

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.2

0.83

0.9

72.6

32.3

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

74.6

0.55

69.1

41.5

Minor 5ss

24.1

-3

3.3

43.4

Minor BPS

0.36

1.7

72.84

44.4

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407