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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9575048_9575818_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9575048 - 9575818

Intron Length:

771

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCGCA

5'SS Class:

strong_major

3'SS Sequence:

TCATTGGGTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTGAA

U12 Branch Point Sequence:

TTTTCTGTCATT

Flanking Amino Acid:

ISGLIDFAIQLLNELSVVEA

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.8

0.91

0.9

35.3

Major BPS

0.55

1.1

63.4

44.3

Major PPT

0.38

1.1

61.1

44.4

Minor 5ss

36.6

-1.5

3.3

47.9

47.8

Minor BPS

53.6

0.19

2.4

82.98

39.3

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407