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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9575983_9576210_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9575983 - 9576210

Intron Length:

228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGGGAA

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCTATGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTCTTTTTATGT

Flanking Amino Acid:

NQDQMAQVFEGLCGVVKHGM

Intron Amino Acid Position:

933

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.4

0.72

69.3

37.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

85.2

0.79

0.8

81.2

29.6

Minor 5ss

28.1

-2.5

3.4

28.9

43.6

Minor BPS

54.4

0.21

1.9

74.38

43.4

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407