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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9576343_9578620_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9576343 - 9578620

Intron Length:

2278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

CTATCCCATTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TTGTTTCTAATC

Flanking Amino Acid:

HLKSKFGELFSDFCSKVKNT

Intron Amino Acid Position:

977

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.7

0.98

0.7

81.3

32.8

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

69.4

0.44

0.9

67.2

34.1

Minor 5ss

30.9

-2.2

3.2

39.6

46.4

Minor BPS

59.3

0.27

1.6

69.97

36.1

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407