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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9579198_9579487_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9579198 - 9579487

Intron Length:

290

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAT|GCAAGTGCA

5'SS Class:

strong_major

3'SS Sequence:

TCCTCTCTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTGTTGTGATCA

Flanking Amino Acid:

GFNDLLCNVDVSDLSFHDSL

Intron Amino Acid Position:

1102

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.9

0.75

1.2

28.9

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

84.4

0.77

0.7

76.4

32.2

Minor 5ss

25.1

-2.9

37.1

40.4

Minor BPS

42.7

-0.5

2.3

55.04

44.2

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407