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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9581215_9581523_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9581215 - 9581523

Intron Length:

309

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGTGTACC

5'SS Class:

major

3'SS Sequence:

TCTTTCCTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTAAT

U12 Branch Point Sequence:

TAATGATTAAAT

Flanking Amino Acid:

FAVLKAVFVLGDAELKGSGF

Intron Amino Acid Position:

1214

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.6

0.58

67.5

37.7

Major BPS

79.4

0.73

0.9

79.6

29.1

Major PPT

85.6

0.8

0.6

81.4

23.6

Minor 5ss

37.2

-1.4

2.5

39.8

Minor BPS

50.6

0.1

2.1

73.09

42.8

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407