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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9581688_9584625_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9581688 - 9584625

Intron Length:

2938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

CTTCATCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAC

U12 Branch Point Sequence:

ATGAGTTTAACT

Flanking Amino Acid:

KYVLRSICQQEWVGERCLKS

Intron Amino Acid Position:

1269

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

77.8

38.7

Major BPS

84.6

0.86

0.8

83.9

22.3

Major PPT

79.9

0.67

0.8

73.5

31.1

Minor 5ss

32.4

-2

40.4

45.7

Minor BPS

58.9

0.36

1.8

74.74

42.3

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407