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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9588921_9589258_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9588921 - 9589258

Intron Length:

338

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAATGAC

5'SS Class:

strong_major

3'SS Sequence:

TTGATCCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTGAT

U12 Branch Point Sequence:

GATCTCTTACTC

Flanking Amino Acid:

KRNQSASKSEDFVLGPSRGV

Intron Amino Acid Position:

1790

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.4

0.86

0.9

78.2

29.5

Major BPS

83.8

0.84

73.6

41.8

Major PPT

80.1

0.68

0.9

73.8

36.7

Minor 5ss

32.3

-2

3.3

42.9

44.7

Minor BPS

53.8

0.1

1.6

61.36

37.9

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407