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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9589410_9589604_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9589410 - 9589604

Intron Length:

195

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTCAG

U12 Branch Point Sequence:

ATGTGCCTAGTC

Flanking Amino Acid:

LYAQNQPLPAGGPRLDTSYR

Intron Amino Acid Position:

1840

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

53.1

0.08

1.6

63.4

44.3

Major PPT

89.6

0.89

0.6

84.7

22.9

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

44.2

-0.4

2.2

57.25

41.8

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407