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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9589811_9590238_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9589811 - 9590238

Intron Length:

428

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCAG

5'SS Class:

strong_major

3'SS Sequence:

TGTTGCCTTCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCCTAT

U12 Branch Point Sequence:

GTTGAAAAAACT

Flanking Amino Acid:

ILRQQLQAKLQGQGIMGQQP

Intron Amino Acid Position:

1909

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

70.6

41.3

Major BPS

68.8

0.47

1.3

66.7

41.7

Major PPT

79.8

0.67

0.9

41.4

Minor 5ss

33.7

-1.9

2.9

38.1

40.9

Minor BPS

-0.6

2.2

64.09

45.4

Associated Gene:

Gene:

MED12

Ensembl Gene ID:

ENSAPLG00000014908

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015716

9560346 - 9591752

31407