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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9629513_9631904_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9629513 - 9631904

Intron Length:

2392

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GCTTCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTGCAA

U12 Branch Point Sequence:

CCCGCTGCAAGC

Flanking Amino Acid:

SLLTLSHHSEGLFQRAIIQS

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.6

0.86

0.9

78.9

33.5

Major BPS

44.3

-0.3

1.5

51.3

44.2

Major PPT

82.9

0.74

0.8

76.8

31.8

Minor 5ss

33.9

-1.8

3.5

49.9

46.5

Minor BPS

35.2

-1.1

2.2

36.68

41.8

Associated Gene:

Gene:

NLGN3

Ensembl Gene ID:

ENSAPLG00000015814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034814

9618558 - 9633951

15394

ENSAPLT00000016483

9618558 - 9633951

15394

ENSAPLT00000037974

9618558 - 9633951

15394