Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9632695_9633113_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9632695 - 9633113

Intron Length:

419

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTGAGCAGG

5'SS Class:

major

3'SS Sequence:

CTGTGTCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCTCTAG

U12 Branch Point Sequence:

CTGGCTCTAGCT

Flanking Amino Acid:

MTYWTNFAKTGDPNKPVPQD

Intron Amino Acid Position:

501

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.1

0.57

1.1

59.7

46.7

Major BPS

-0.7

1.6

32.1

43.1

Major PPT

79.3

0.66

0.9

37.4

Minor 5ss

32.9

-2

2.8

31.4

42.5

Minor BPS

46.2

-0.2

63.87

46.7

Associated Gene:

Gene:

NLGN3

Ensembl Gene ID:

ENSAPLG00000015814

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037974

9618558 - 9633951

15394

ENSAPLT00000034814

9618558 - 9633951

15394

ENSAPLT00000016483

9618558 - 9633951

15394