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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9645691_9645785_R


Intron Information:

Intron Rank:
23

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
9645691 - 9645785

Intron Length:
95

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAG|GTAGGGTCT

5'SS Class:
strong_major

3'SS Sequence:
TGCCCCTTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CCATCAT

U12 Branch Point Sequence:
CCAGCCATGATC

Flanking Amino Acid:
YAPAKQKKGRDGGTGKRKRE

Intron Amino Acid Position:
1330

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
81.1
0.73
1
73.1
38.8

Major BPS
63.3
0.33
1.2
65.6
39.7

Major PPT
78.8
0.65
0.8
72.5
32.2

Minor 5ss
38
-1.4
3.6
56.2
48.2

Minor BPS
46.5
-0.2
1.7
50.63
40.9

Associated Gene:

Gene:
ZMYM3

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9644080 - 9670346
26267