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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9647127_9647545_R


Intron Information:

Intron Rank:
21

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
9647127 - 9647545

Intron Length:
419

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGAGGGAG

5'SS Class:
strong_major

3'SS Sequence:
CTGTCCTTTCTAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTGAC

U12 Branch Point Sequence:
TCTCTCCTGACT

Flanking Amino Acid:
IYYLCLGIQQYLLENNRMVN

Intron Amino Acid Position:
1207

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.2
0.81
0.9
69.1
37.5

Major BPS
68.9
0.47
1
59.2
39.1

Major PPT
77.3
0.62
0.8
69.5
36.8

Minor 5ss
23.1
-3.1
3.2
27.7
44.2

Minor BPS
58.3
0.34
1.7
77.12
39.3

Associated Gene:

Gene:
ZMYM3

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9644080 - 9670346
26267