Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9650081_9650261_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9650081 - 9650261

Intron Length:

181

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAAGCGAC

5'SS Class:

major

3'SS Sequence:

CTGCTGTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAT

U12 Branch Point Sequence:

TGTGTCTGATCT

Flanking Amino Acid:

VPVPFSMPVPVPVPMFLPTT

Intron Amino Acid Position:

958

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.8

0.7

67.1

38.9

Major BPS

73.6

0.59

1.2

65.3

43.7

Major PPT

67.1

0.38

61.6

38.9

Minor 5ss

37.1

-1.5

3.4

50.6

46.1

Minor BPS

51.6

0.13

1.8

73.14

43.6

Associated Gene:

Gene:

ZMYM3

Ensembl Gene ID:

ENSAPLG00000000982

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001176

9644080 - 9670346

26267