Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9678566_9680710_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9678566 - 9680710

Intron Length:

2145

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGTGCG

5'SS Class:

major

3'SS Sequence:

TTTTTCTTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

TTTTTCTTCACA

Flanking Amino Acid:

RCSDGSFLLTTFPRPVTVEP

Intron Amino Acid Position:

186

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

1.3

69.7

41.3

Major BPS

73.1

0.58

73.8

32.3

Major PPT

91.6

0.94

0.6

87.6

22.6

Minor 5ss

34.4

-1.8

3.1

40.9

38.5

Minor BPS

75.4

0.79

1.7

86.69

32.1

Associated Gene:

Gene:

NONO

Ensembl Gene ID:

ENSAPLG00000002642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039286

9677166 - 9692201

15036

ENSAPLT00000002689

9676772 - 9688550

11779