Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9682036_9682305_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9682036 - 9682305

Intron Length:

270

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

TTATCTTATATAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAA

U12 Branch Point Sequence:

ATTTTTTTAACT

Flanking Amino Acid:

HEHQVMLMRQDLMRRQEELR

Intron Amino Acid Position:

284

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.5

37.3

Major BPS

87.3

0.93

0.8

36.5

Major PPT

77.5

0.62

0.9

73.6

35.8

Minor 5ss

40.3

-1.1

2.9

53.5

43.3

Minor BPS

84.4

1.16

0.9

93.73

26.7

Associated Gene:

Gene:

NONO

Ensembl Gene ID:

ENSAPLG00000002642

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039286

9677166 - 9692201

15036

ENSAPLT00000002689

9676772 - 9688550

11779