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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9682391_9683140_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
9682391 - 9683140

Intron Length:
750

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGGTGG

5'SS Class:
strong_major

3'SS Sequence:
CACTTCTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TGAGCAT

U12 Branch Point Sequence:
TTGTGCTGAGCA

Flanking Amino Acid:
EVQKRKQLEIRQEEERRRRE

Intron Amino Acid Position:
312

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
87.7
0.89
0.9
70.4
42.5

Major BPS
49.2
-0
1.5
59.7
46.7

Major PPT
82.1
0.72
0.8
76.3
31.8

Minor 5ss
36.1
-1.6
3.3
46.8
48.5

Minor BPS
49.6
-0
2.1
68.23
44.1

Associated Gene:

Gene:
NONO

Ensembl Gene ID:

Chromosome:
10

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

9677166 - 9692201
15036

9676772 - 9688550
11779