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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9697906_9700027_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

9697906 - 9700027

Intron Length:

2122

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGA|GCTAGAGGA

5'SS Class:

weak_major

3'SS Sequence:

CGAATCAAAAAAG|T

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

GAATCAAAAAAG

Flanking Amino Acid:

EPEKAAASTEDVGVSFLRKK

Intron Amino Acid Position:

147

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.1

0.03

1.4

51.9

41.8

Major BPS

62.4

0.31

32.1

Major PPT

46.1

-0.2

1.1

39.3

36.9

Minor 5ss

17.1

-3.8

3.6

18.7

29.7

Minor BPS

39.1

-0.9

2.1

42.43

41.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000002871

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002956

9694776 - 9700157

5382