Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9711933_9712032_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9711933 - 9712032

Intron Length:

100

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGGCGG

5'SS Class:

major

3'SS Sequence:

CTGCTGTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCGAG

U12 Branch Point Sequence:

TGTCCCTCTGCT

Flanking Amino Acid:

QLEGDSVLDKESKKHLAGLG

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.8

0.51

1.1

51.5

46.7

Major BPS

39.1

-0.6

1.6

33.2

Major PPT

70.1

0.45

0.9

61.1

40.1

Minor 5ss

23.6

-3

3.2

29.6

43.2

Minor BPS

39.3

-0.7

3.6

71.19

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003307

9711067 - 9740685

29619