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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9725282_9725915_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9725282 - 9725915

Intron Length:

634

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

CCTCCTGTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTCAA

U12 Branch Point Sequence:

TCTGGAGTAACT

Flanking Amino Acid:

ECQRIFDLQNKVLESTEILS

Intron Amino Acid Position:

1122

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.1

0.87

0.9

84.2

27.2

Major BPS

78.4

0.71

0.9

81.3

29.8

Major PPT

77.1

0.61

0.9

37.5

Minor 5ss

44.5

-0.6

2.8

38.4

Minor BPS

43.5

-0.4

2.6

68.33

48.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003176

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003307

9711067 - 9740685

29619