Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9754619_9754815_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9754619 - 9754815

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTAAATGGA

5'SS Class:

strong_major

3'SS Sequence:

CTTGATTTCTCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TTGTTCATAACG

Flanking Amino Acid:

EALMHYKEAIRISPTFADAY

Intron Amino Acid Position:

379

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.3

0.83

0.9

74.8

35.6

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

79.1

0.65

0.9

76.5

37.3

Minor 5ss

31.4

-2.1

3.2

40.8

45.4

Minor BPS

65.8

0.36

1.7

71.87

Associated Gene:

Gene:

OGT

Ensembl Gene ID:

ENSAPLG00000003836

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004014

9741946 - 9764515

22570