Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_10_9776446_9776997_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9776446 - 9776997

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACAACC

5'SS Class:

major

3'SS Sequence:

CTTCTTCTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTCAT

U12 Branch Point Sequence:

TTGTCACTCATT

Flanking Amino Acid:

EEQDAYRRIHSLTHLDSVTK

Intron Amino Acid Position:

216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.1

72.5

37.3

Major BPS

74.8

0.62

0.9

75.3

29.7

Major PPT

0.9

0.6

88.2

21.5

Minor 5ss

40.3

-1.1

2.9

53.5

43.3

Minor BPS

47.2

-0.1

2.3

73.71

43.3

Associated Gene:

Gene:

BRCC3

Ensembl Gene ID:

ENSAPLG00000004484

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044638

9775584 - 9779799

4216

ENSAPLT00000004603

9775584 - 9779799

4216