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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9836253_9836737_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9836253 - 9836737

Intron Length:

485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

TCTTCCGCTCCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAT

U12 Branch Point Sequence:

TGCTAATTACTG

Flanking Amino Acid:

KDKYLAKHSSIFDQLDVVSY

Intron Amino Acid Position:

395

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

79.3

0.73

1.1

77.9

34.9

Major PPT

78.6

0.64

0.8

69.6

36.7

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

44.3

-0.5

50.07

43.9

Associated Gene:

Gene:

MPP1

Ensembl Gene ID:

ENSAPLG00000005377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038772

9826296 - 9840912

14617

ENSAPLT00000005594

9825583 - 9840912

15330