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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9838148_9839560_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9838148 - 9839560

Intron Length:

1413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGTGAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCCTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCCTCAG

U12 Branch Point Sequence:

GCCTCCTGAGTG

Flanking Amino Acid:

FIAPTDKAEESEALQQLRKD

Intron Amino Acid Position:

542

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

1.01

0.7

86.6

22.3

Major BPS

58.4

0.21

1.5

67.6

40.6

Major PPT

82.9

0.74

0.8

77.1

31.6

Minor 5ss

28.9

-2.4

3.2

39.6

46.4

Minor BPS

47.6

-0.3

1.8

48.74

45.1

Associated Gene:

Gene:

MPP1

Ensembl Gene ID:

ENSAPLG00000005377

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038772

9826296 - 9840912

14617

ENSAPLT00000005594

9825583 - 9840912

15330