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Intron Name: Anas_platyrhynchos_platyrhynchos_10_9858404_9859242_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

9858404 - 9859242

Intron Length:

839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

TTGTGCTTTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AGGTGAG

U12 Branch Point Sequence:

GCTCCAGGCACT

Flanking Amino Acid:

CSLPGSSWGERLADAVTPLW

Intron Amino Acid Position:

143

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

43.4

-0.4

1.6

34.6

43.7

Major PPT

0.72

0.9

73.4

41.9

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

-0.9

2.5

56.31

45.3

Associated Gene:

Gene:

TRMT2B

Ensembl Gene ID:

ENSAPLG00000013756

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042468

9857976 - 9866624

8649

ENSAPLT00000014330

9857976 - 9866477

8502